Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGRWMINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYK-NINQAPIVKVTRILVEIIELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLS-KKPITISSHENLLDQVDSFQTGNGLLTR
2GAU Chain:A ((31-230))
-------------KEIQPFPCKKASTVF---SEGDIPNNLFYLYEGKIKILR-----RFHISRIVKPGQFFGMRPYFAEETCS----STAIAVENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFEN--DGATLSIYLSREELATLSNMTVSNAIRTLSTFVSERMLALDGKRIKIIDCDRLQKTAR-----------
General information:
TITO was launched using:
RESULT:
Template:
2GAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139538 for 1409 contacts (-99.0/contact) +
2D Compatibility (PS) -20855 + (NN) -5181 + (LL) 1792
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -173832.0 ( -123.37 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_2GAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GAU-query.scw
PDB file :
Tito_Scwrl_2GAU.pdb
: