Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELNKFVGNKIKQYREERGLNQEALAEKLHTTRQTISRYENGDRKANQDVLFELAKIFNKRLDDFFPERNLPPVDERLVTIAAHIDDDVTEEEMRDILAYIEMKKKLHRGM
1LLI Chain:B ((26-78))
--------------KNELGLSQESLADKLGMGQSGIGALFNGINALNAYNAALLAKILKVSVEEFSP--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1LLI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15044 for 316 contacts (-47.6/contact) +
2D Compatibility (PS) -5893 + (NN) -3724 + (LL) 4828
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -23183.0 ( -73.36 by residue)
QMean score : 0.770
(partial model without unconserved sides chains):
PDB file :
Tito_1LLI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LLI-query.scw
PDB file :
Tito_Scwrl_1LLI.pdb
: