Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANKGILSYQVIETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLISLNVAVIEKLQEDMGFLFR
2K5N Chain:A ((1-74))
-----------MAMNGTITTWFKDKGF----------GFIKDENGDNRYFH--VIKVANPDLIKKDAAVTFEPTTNNKGLSAYAVKVVPLEHHHHHH---
General information:
TITO was launched using:
RESULT:
Template:
2K5N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7973 for 481 contacts (-16.6/contact) +
2D Compatibility (PS) -7594 + (NN) 5132 + (LL) 2452
1D Compatibility (HY) 400 + (ID) 550
Total energy: -8133.0 ( -16.91 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_2K5N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5N-query.scw
PDB file :
Tito_Scwrl_2K5N.pdb
: