Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVSFIFGSQSIESEAAMVSRVKNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSNKENKL-ELLDSSKRYVVGAGINTRDYE-ERVPALVEAGADILCIDSSEGYSEWQKRTLDYVRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICITREQKGIGRGQATALIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFSRFDESPTNKVNLNGTYMKEYWGEGANRA-RNWQRYDLGGDKKL-----------------SFEEGVDSYVPYAGSLKDNVAISLSKVRSTMCNCGALNIPELQQKA-----KITLVSSTSIVEGGAHDVVVKDASNNLIK |
| 4AF0 Chain:A ((61-537)) | ----------TYNDFLVLPGHINFPA--SDVSLQSKATK-------NIVLNTPFLSSPMDTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRRVKKYEN-----------------------------------------------------------------------------------------------------------------------YPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTY-PKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVA----EFASRFG--IPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHT-----------GLDNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSCARSGSLRFELRTAS--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200505 for 2936 contacts (-68.3/contact) +
2D Compatibility (PS) -35664 + (NN) -14377 + (LL) 9876
1D Compatibility (HY) -20400 + (ID) 5800
Total energy: -266870.0 ( -90.90 by residue)
QMean score : 0.493
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