Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLLVAVISVFALVLTACGGSGASSDKANGSGKAKDGGSLIIGVTGDPEVINPNYASDRVTL-TIQQAVYAPLFWEVD--GK--PALAKSLDISDDNLTYTVKLKDGLTWHDGK------PLTADDVVFTVNSILDTKQNSP---------N--RGNFVFDDKPVKVEAVDDTTVKFTLPTVAPAFENTIK--TFFPIPKHIFEGVENI---EKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKS-IQPSDRNKVEKASAVNIITYPENRLSYATFNENQPALKSKELRQALSYALDREEIIDAAYGSDEYAKPASSFLTENTKYFTDKVETYDQDIAKAKKLVKESGFDTSQKLTVYYLN----NSKSQESIALYLQQQYKEIGVTLDLKPTDPNALSNITLDRKNADYSIALNGYIMG-NDPDAYK-SLYLS---DAPYNYSNYHNKDLDALWEKGAVTADDKERQEIYEKIQNTIADDAVIYPISYDNAVLALDSRYGGQKAATPQPVTMFRDLSKLYLTE |
1DPE Chain:A ((1-507)) | ---------------------------------------KTLVYCSEGSPEGFNPQLFISGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELIS---EVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLD--LNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGA--GVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRA-K-D-GEHQTVMMGWTGDNGDPDNFFATEFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYV---VDPLGKH-HFENVSIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76036 for 3865 contacts (-19.7/contact) +
2D Compatibility (PS) -50553 + (NN) -18415 + (LL) 3072
1D Compatibility (HY) -26000 + (ID) 5800
Total energy: -173732.0 ( -44.95 by residue)
QMean score : 0.431
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