Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MAKASEHFFYVLKCSDNSYYGGYTTDVLRREAEHNAGIRCKYTKTRRPVKV---IHFEKFETRSEATKAEAAFKKLSRKNKDAYLIQREEESE------------ |
| 2KNR Chain:A ((1-118)) | MRLKSEMFVSALIRRVFAAGGFAAVEKKGAEAAGAIFVRQRLRDGRENLYGPAPQSFADDEDIMRAERRFETRLAGVEGEEIAALLERERRFDSDLWVVEIETDEIGTLLTLVDQPQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14047 for 574 contacts (24.5/contact) +
2D Compatibility (PS) -9640 + (NN) -4631 + (LL) 0
1D Compatibility (HY) 2800 + (ID) 550
Total energy: 2026.0 ( 3.53 by residue)
QMean score : 0.185
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