Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
3L3U Chain:A ((61-153))
------------VKTVHTDNGSNFTSTTVKAACDWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVR----DQAEHLKTAVQMAVFIHNH-KRKGGIGGYSAGERIVD--
General information:
TITO was launched using:
RESULT:
Template:
3L3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5929 for 496 contacts (-12.0/contact) +
2D Compatibility (PS) -9464 + (NN) -2403 + (LL) 1552
1D Compatibility (HY) 3200 + (ID) 800
Total energy: -13844.0 ( -27.91 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_3L3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L3U-query.scw
PDB file :
Tito_Scwrl_3L3U.pdb
: