Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNIMIALIPALLWGTVPLIITKFGGSTRQQTMGMTLGALTFAVIVFFFTDPVYTLKTVGISFITGCLWTVGQMFQLQAFKIIGVSKAMPISTGMQLVGT-TLCGVILFHEWDTTLRIILGFIAL-ALIVGGIFLTSYAEKEEDGTNALK-QGLITLFISACGYVGLVVLIQGFKIDGINAILPQAIGMV-IS-ALI-MTHS-GGTEKRFNKRTLLLTIPGVIWAAGNVAMVHANQLVG-VATGFSLS-QLGVVISTIGGIILLKEKKTQKEMLFVIVGVVLVVLGGILIGVAKGA |
| 4PW1 Chain:A ((16-252)) | ----------------NLLYLNSGEELNLYPWNLYTGQEQE-----LFEEEIVSFAANSVRILGGGSWTDEELYPLIKFRYSG--------QDLRFLKDMA------LTEKDGR-----RYLVNMALDPNGLCYFSYVNQDEREATADEMD------------QALGKLQEDWEKFLSDPLPKTDNAFYMFFMRCQMLSDQMRKEQYSDYIGDNLYTIWELVLKSEFTSLSYDNHIYAMYSNDGGTSMVL--IYSPIEE---------------RFVGFSLKY------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156468 for 1484 contacts (-105.4/contact) +
2D Compatibility (PS) -21181 + (NN) 1908 + (LL) 8204
1D Compatibility (HY) -10400 + (ID) 1600
Total energy: -179537.0 ( -120.98 by residue)
QMean score : 0.012
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