Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MPKTIASIKTNLDSRLGKALTLKANGGRKKTIERCGILAETYPSVFIVELDQD----ENNFERVSYSYTDILTDAVELVFTDDNKELAL
3FB9 Chain:A ((0-88))
GMSDAFTDVAKMKKIKEEIKAHEGQVVEMTLENGRKRQKNRLGKLIEVYPSLFIVEFGDVEGDKQVNVYVESFTYSDILTEKNLIHYLD-------
General information:
TITO was launched using:
RESULT:
Template:
3FB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3353 for 463 contacts (-7.2/contact) +
2D Compatibility (PS) -7913 + (NN) 906 + (LL) 256
1D Compatibility (HY) 2000 + (ID) 250
Total energy: -8354.0 ( -18.04 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_3FB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FB9-query.scw
PDB file :
Tito_Scwrl_3FB9.pdb
: