Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIAKFFRNVSSEMHKVTWPTRKELLTYTVTVVITVVLFALFFMLIDFGIEQIIKLIV
3BO0 Chain:B ((4-60))
-KATVAFAREARTEVRKVIWPTRKPTKDEYLAVAKVTALGISLLGIIGYIIHVPATYI-
General information:
TITO was launched using:
RESULT:
Template:
3BO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11672 for 233 contacts (-50.1/contact) +
2D Compatibility (PS) -5625 + (NN) -1088 + (LL) 400
1D Compatibility (HY) 0 + (ID) 800
Total energy: -18785.0 ( -80.62 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_3BO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BO0-query.scw
PDB file :
Tito_Scwrl_3BO0.pdb
: