Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQS-AVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQ-QITPLLLGTANQLLTIDDIKSL-R--------EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC--ALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKR-I-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL |
1V72 Chain:A ((19-350)) | ---------------------GASPEVAQALVKH-SSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTP-PW-GNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQA-T-EVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGTEANILFCRLDS---AMI----DALLKAGFGFYHDRW----GPNVVRFVTSFATTAEDVDHLLNQVRLAA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197361 for 2781 contacts (-71.0/contact) +
2D Compatibility (PS) -34413 + (NN) -9031 + (LL) 1552
1D Compatibility (HY) -4400 + (ID) 2850
Total energy: -246503.0 ( -88.64 by residue)
QMean score : 0.500
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