Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYKIKEMPLEELEPKVVEGLLEHKERLGYNIPKKDTEYIGFAALSEVGEMVGGVTAKISYGELHVSLLSVDPSTQGSGVGTELMAQIERYGRANSCHHISLTTFSYQAPEFYRKCGFTELGRVKDFPIKGEEKYFFIKYL
1I1D Chain:C ((98-154))
----------------------------------------------------------------HIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDC-DEKNVKFYEKCGFSNAG-------------------
General information:
TITO was launched using:
RESULT:
Template:
1I1D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28421 for 299 contacts (-95.1/contact) +
2D Compatibility (PS) -6256 + (NN) -2389 + (LL) 6352
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -36464.0 ( -121.95 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1I1D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I1D-query.scw
PDB file :
Tito_Scwrl_1I1D.pdb
: