Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQDLQNRLVDQEILHGSDLLDEIHEVKQNNEQLIIELNTKYHTKKEVTKYLSDITGKPVDPSVDVSLPFYSDFGKHITFGKNIFINLNVTFVDLGGITIEDNVLIGPGARLVTVNHLVSPKKR-RGL-RVAPICVKKNAWIGANTTILSGVTIGENAIVAADATVTKDVPPNVIVAGSPAKQIRKIIEE
4EGG Chain:D ((47-184))
--------------------------------------------------KVLIDALFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKI---
General information:
TITO was launched using:
RESULT:
Template:
4EGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86861 for 1044 contacts (-83.2/contact) +
2D Compatibility (PS) -15017 + (NN) -3673 + (LL) 4688
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -114813.0 ( -109.97 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_4EGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EGG-query.scw
PDB file :
Tito_Scwrl_4EGG.pdb
: