Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LIIDVLQHVPH--EGPGLIANWARENQHQLKIHSLF------EENAHVP-NDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVN-KEKEVGWFPVKRTS-DKLLF--FPKSLNV-FHWHQDTF-ALPT---GSTRLFASEGCLNQAFLYG-ENIIGLQFHFEMEKAGIETILRIDEAFITPGKYVQSVEVMRE----K-DVPEDNKQMLEAILDYLINPKTI |
| 2VDJ Chain:A ((36-291)) | LKIAILNLMPTKQETEAQLLRLIGNTPLQLDVHLLHMESSFYKTFRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLKEKMFGVFEHEVREQHVKLLQGFDELFFAVHSRHTEVRESDIREVKELTLLANSEEAGVHLVIGQEGRQVFALGHSEYSCDTLKQEYERDRDKGLNI---DVPKNYFKHDNPNEKPLVRWRSHGNLLFSNWLNY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122644 for 1787 contacts (-68.6/contact) +
2D Compatibility (PS) -23881 + (NN) -6626 + (LL) 668
1D Compatibility (HY) -3200 + (ID) 1750
Total energy: -157433.0 ( -88.10 by residue)
QMean score : 0.469
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