Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATQKNL-VDLATKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEPSDKFVSVNNDTIYS-NAPIDVSAGPVVLSVPDTSGR-YYVLQFVDAWSNNFAYVGKRATGTSAGKFLLTPPNWNGDVPADMIEIKFP-TNIGIIIGRLACDGEADLPTVRELQEQLK---ITPLNEGKEVDGFPEYDRSLGKE-----LAFFEQ-L-RVYMAQFPPAE-RDLVKQESFAPIGLMEKGVSPYSNPSEELKNALIEGAKAGLANIKKATTNFKSENGWGLTQHLFDYNADFFEIGTKKSLDWVIEDREEA-YIIRAVSAITALWGNHGYEAVYLMTWTDTDGNALNGKNKYTLELNP----IPPVDSFWSITMYDLPEYFLCENPI-NRYSI-GDRTPGIQYNDDGGITIVVSKDEPTDP-----KERANWLP-APDAEFRPMFRLY-NPQQPLVDGSYHFPGFEKK |
| 4QT9 Chain:A ((19-432)) | -LSDDALMDTVQRRTFLYFWE--------------GAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYV--TREEGLARMERIVSFLEKADRFHGAYPHWWYGDT-GK---VKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAI---VSPHKVEGIELHLRY-QGTEAG---------------------PLFWAQYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIVY--TPEYSLQ---VMRHLYNMGDKVFG-----PFGFYDAFSETDNWYPQRYLAIDQGPIAVMIENYRTGLLWKLFMS--HPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36506 for 3320 contacts (-11.0/contact) +
2D Compatibility (PS) -40387 + (NN) -17651 + (LL) 4252
1D Compatibility (HY) -8000 + (ID) 3100
Total energy: -101392.0 ( -30.54 by residue)
QMean score : 0.257
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