Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAAAKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDAVRQM-GEVIKETADLTADTQGLGC---AKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLAPTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVINNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFKN- |
4CFP Chain:A ((15-341)) | ---------------------------------DTNGFDILMGQFAHNIENIWGFKEV-----------------------VIAGP---KDYVKYT---DQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDD-PSSVDLYSDVDDITISKEPFLYGQVV--------DNTGQPIRWEGRASNFADYLLKNRLKSRS----NGLRIIYSVTIN---MVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTQSS-------------FNP-YAVSRSDA-----LGLMQVVQH--TAGKDVFRSQ---------GKSGTPSRSFLF-----DPASNIDTGTAYLAMLNN------VYLGGI---DNPTSRRYAVITAYNGGAGSVL------RVFSNDKIQAANIINTMTPGDVYQTLTTR-HPSAESRRYLYKVNTAQKSYRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99762 for 2629 contacts (-37.9/contact) +
2D Compatibility (PS) -34404 + (NN) -7977 + (LL) 9208
1D Compatibility (HY) -9200 + (ID) 3150
Total energy: -145285.0 ( -55.26 by residue)
QMean score : 0.217
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