Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METRELKNGQIMMIRKATKEDSSNIITYLNEVAGETDYLSFGQGEFAFSIAEEAE-YIEESDKNPGSVMLLCFIDDELASISQLIGHIKKRELHTSELAISIRKKYWGLGIGTICMEELIKYAKSSEYLKLIYLEVVTENKRAINLYKKFGF-IEAGEIPALMQVDRRYLDVTMMYLVI
2I79 Chain:B ((5-167))
-----------LLIREAEPKDAAELVAFLNRVSLETDFTSL-DGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKFIDVYLM----
General information:
TITO was launched using:
RESULT:
Template:
2I79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108624 for 1163 contacts (-93.4/contact) +
2D Compatibility (PS) -16417 + (NN) 3054 + (LL) 1372
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -135615.0 ( -116.61 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2I79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I79-query.scw
PDB file :
Tito_Scwrl_2I79.pdb
: