Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LILFYFLLIIGKFTFAYFQIFKDPNFLALGMDLLFIVLLLGLIHLFAPVRSHIYWYAGMSLFIGILMLVCVLYARFYNEVPTYHSFSLIGEVGVVKNSATSLLSGTDWLYILDIILLPFILYFNIKKGHEFPSFRLTSRVYGVSFISTLLILSGFTYFMMQQNIISDSKRAKRMGIFTFNISTALTGADHVKAADITAKNVNDIKGVSVKSNPDYFGAAKGKNLIIVQLESFQRNLTNVKINGQSITPTLDGLQNETMYSNQFFQTVSKSNTADAEWSVYTSTFPSGYYTNTQTY------GDRVIPSMPRLLGKNDYKTATFHTNDASF---YNRDEFYPAVGFDKFYDRKF-F------GD----ED-----VI-----------GFSPSDEVLYNKAFPILEEQYKNNQKFYAQLISVSSHMPFDIPKDK-QE-IDL---------P-------SDLKDTELGNYFEAVHYADKQLGEFIQKLKDSGIWDDSVVVFYGDHHIIKTDQLPE--------EQKKYVNRSTQLKAEPADDYRIPFFLHYPGME-NPGEIKNVGGEIDIMPTVMNLLGIKTGD-QIMFGTDILNSS--N----NYVPERYT--------MPEGSYFTNSYMYQP------DESFETGAATNYDGTNKELSSDVKKRFDASRKLLQYSDSYVNNLPLRNEDK |
| 3ED4 Chain:A ((27-447)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAP--LSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDATLDNAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNK-KDSKPFFLYVAFTEVHSPLAS-PKKYLDMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRG-RK-DNLWEGG--IRVPAIIKYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPVLEQKALKREKPLIFGIDMPFQDDPTDEWAIRDGDWKMIIDRNNKPKYLYNLKSDR----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ED4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40754 for 2941 contacts (-13.9/contact) +
2D Compatibility (PS) -36028 + (NN) -11451 + (LL) 19224
1D Compatibility (HY) -6000 + (ID) 2750
Total energy: -77759.0 ( -26.44 by residue)
QMean score : 0.279
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