Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAKYEENFKKSLVALYRRGKTKHSICQEFNVPHSTFGKWIKKFNNEENIESNEILNILQAQELKKQRVLLEEELSILTEAIAVFENPLPKNK
1K78 Chain:A ((31-77))
---RPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYE-TGS-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19675 for 284 contacts (-69.3/contact) +
2D Compatibility (PS) -4845 + (NN) -1188 + (LL) 4636
1D Compatibility (HY) -3600 + (ID) 350
Total energy: -25022.0 ( -88.11 by residue)
QMean score : 0.756
(partial model without unconserved sides chains):
PDB file :
Tito_1K78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K78-query.scw
PDB file :
Tito_Scwrl_1K78.pdb
: