Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLFVSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
2XIU Chain:B ((1-61))
MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIF------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27698 for 397 contacts (-69.8/contact) +
2D Compatibility (PS) -6487 + (NN) -1625 + (LL) 10132
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -31928.0 ( -80.42 by residue)
QMean score : 0.718
(partial model without unconserved sides chains):
PDB file :
Tito_2XIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XIU-query.scw
PDB file :
Tito_Scwrl_2XIU.pdb
: