Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNG--FKAVPGKLYLTATYIVHKPNDY----FDEEINIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVV---NKQKKWLEAVSEVLESRGESEKLG
1V61 Chain:A ((25-131))
---LGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEI-----EGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSGPSS----
General information:
TITO was launched using:
RESULT:
Template:
1V61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35030 for 626 contacts (-56.0/contact) +
2D Compatibility (PS) -10301 + (NN) 1693 + (LL) 924
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -46264.0 ( -73.90 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_1V61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V61-query.scw
PDB file :
Tito_Scwrl_1V61.pdb
: