Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVGIIIGTHGEAARELLKSTEMIIGKQDNVEFITFVPGENTDTLITKYKEKLDKLDTSEGVIFMVDLFGGSPYNASSQIALP----EDNMDVVTGVNIPMLLETLSMRAASNQKDLVETALTAGSGGVKSLKQSLPKIETEVGEDDL
2BTO Chain:A ((117-191))
-----------------------------------------LPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPS-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2BTO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11324 for 280 contacts (-40.4/contact) +
2D Compatibility (PS) -6381 + (NN) -2832 + (LL) 5804
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -18783.0 ( -67.08 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_2BTO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BTO-query.scw
PDB file :
Tito_Scwrl_2BTO.pdb
: