Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAYPQFDVILKALNLSSVGVIITDPEQKDNPIIFVNTGFENITGYAKEEALGSNCHFLQGDDTDKEEVAKIRHAI-NEKSTANVLLKNYRKDGTSFMNELTIEPIYDDHEH-LYFVGIQKDVTTEHDYQLELEKSLTEIEKLSTPIVPIKENICVLPLIGSLTHDRFQHMSEYVSEYMDHGKEDYLIMDLSGLAEFNEDAVMNLVKFHGFMKLTGVELIITGISPKFAMTLIRYEENLASLTTYSTIKEALQFY |
2Z6D Chain:B ((17-121)) | ------------------QTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCGRLL-NYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVS----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24168 for 697 contacts (-34.7/contact) +
2D Compatibility (PS) -11127 + (NN) -4142 + (LL) 12192
1D Compatibility (HY) -9600 + (ID) 2500
Total energy: -39345.0 ( -56.45 by residue)
QMean score : 0.563
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