Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------L-DNNQKDLNQVIRQLKEKG---IVVE------KTKSRKDIWK-SVSSKAMPNMTLRLQ------------------------ |
| 3LYH Chain:A ((4-123)) | PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRHLRKDVPAMIERLEAEHGVTIRLAEPIGKNPRLGLAIRDVVKEELERS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2763 for 221 contacts (12.5/contact) +
2D Compatibility (PS) -4994 + (NN) -324 + (LL) 0
1D Compatibility (HY) 400 + (ID) 250
Total energy: -2405.0 ( -10.88 by residue)
QMean score : 0.419
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