Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFIDNNNEKDPRINLAVEEFILTELNL-DEPVLLFYINKPSIIIGRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFI-TEDDGESFHNFAKFTQPIVEALKRLGVNAE----------LKGRNDLLIDGFKVSGNAQFATKGKMFSHGTLMYDLNLDNVAASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFGVEKVEDVKEYKLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGVITDIKIFGDFFGVKNVADIEEKLVNTTYKREVLAEALVDIDVKEYFGNITKDEFLDLLY |
| 2C8M Chain:B ((15-255)) | ------------RMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL------------KSTRERVANVTDFVD--VSIDEVRNALIRGFSETLHI-DFREDTITEKEESLARELFDKKYSTEEWNMG--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116335 for 1743 contacts (-66.7/contact) +
2D Compatibility (PS) -23279 + (NN) -7459 + (LL) 7496
1D Compatibility (HY) -16000 + (ID) 3850
Total energy: -159427.0 ( -91.47 by residue)
QMean score : 0.597
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