Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MTETRTEKKKKTTSTFTKVMKIAS---VALLGIIFFSITGLAAKYYITVQNTFSKIN---VPLESSNKTLSDLEKKKPFSVLLMGSDARAGEKNGRADTIILATANKQQNAVEMVSIPRDTKVDYGN-GDIGKINASYSNGGPSGTVSAV------EKLMPGVPVDYFISINMEGFKDLVDAVGGITVYNDIDLTEVNS--KFVKGNITLNG----TEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMA-ANYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDITE |
| 2E7J Chain:A ((8-371)) | DFINIDPLQTGGKLTEEARQALLEWPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY-PDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGAD-FIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKP---GLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13072 for 2589 contacts (-5.0/contact) +
2D Compatibility (PS) -33293 + (NN) -3557 + (LL) 492
1D Compatibility (HY) -4800 + (ID) 2200
Total energy: -56430.0 ( -21.80 by residue)
QMean score : 0.199
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