Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLLKDKFGRVHDYIRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVK----------FGIKKVRITG-GEPLLRTD-IVEIVRGLGAIPE----IEDISITTNAMYL-AKKAEALKEAGLTRVNISLDSLHADRFKAITR---GGRLQKVLDGIQKAEEV----GLFPIKLNVVLIKGQN--DDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDTIFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGYIKACLYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQIGG |
| 3RFA Chain:A ((114-317)) | -----------RATLCVSSQVGCALECKFCSTAQQG----FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM---IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQG-RVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGA---------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77130 for 1288 contacts (-59.9/contact) +
2D Compatibility (PS) -19519 + (NN) -7781 + (LL) 9328
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -106402.0 ( -82.61 by residue)
QMean score : 0.446
|
|
|