Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEKNPAYGIYQFSNSGTATWFEFATEILKDKDVTVN--PCTSDEFPQKAERPKTSIMSLEKVEKLGF-NIPTWQDALVRFKK |
| 3SC6 Chain:B ((8-280)) | --VIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTS-LYGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVST----AAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124696 for 2297 contacts (-54.3/contact) +
2D Compatibility (PS) -28447 + (NN) -8500 + (LL) 364
1D Compatibility (HY) -25600 + (ID) 5600
Total energy: -192479.0 ( -83.80 by residue)
QMean score : 0.541
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