Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLFQDDSLTLHTDLYQLNMMKAYFDDGLHERRSVFEVFFRDMPFDSGFVVFAGLERIIHYMQNLRFTETDIAYLHDE-LGFDGPFLEYLRNFKFKG---NILAAKEGEFVFKTEPILQVEASLAEAQLIETALLNIVNF---------------QTLIATKAARIRSVIDDETFAEFGTRRAQEMDAA--IWGTRAAYIG-GCDSTSNVRAGKIFGIPVSGTMAHAMVQAYR-------DELEAFRSYAKTHF-DS-IFLVDTYDTLKSGVPNAIKVAKEMGDKINFIGIRLDSGDMAFLSKKARQMLDEAG-FTEAK-IFASSDLDEHTILSLKA--QKAKIDSWGVGTKLITAY--DQPALGAVYKMAAIADE-NDILQDSIKLSSNTEKVSTPGKKKVYRIITNEDGLKAEGDYIALADESLENVDKLTMFHPVHTYIMKTVENFTARELLVPIFQNGELVYDMPSLDEIKAYKEENLALLWDEYKRTVRPEQYPVDLSVKCWKNKMRNIEKVRKSVQLHSPVELDMPF |
| 2IM5 Chain:A ((4-377)) | -------IRSILDTDLYKFTTGYAYAKLFP-RAYGEFRFIDR-NRQGFTEEFAELVRGEIRAMAALSLTRDEKEFLQRELPYLPPIYIDFLDGFRFDPEEVTVSIDAQGH------LDIRAQGLLYRVTLWETPILAVISELYYRFIGAEPDWKQVEEVTRSKGELMRE-H-RATFSIFGMRRRFSLEVEDRVTDILKQYAGESLFGTSNVHLAHKHGLRVSGTHPHEWIQFHGAIYGYKMANYVAMEDWINVYDGDLGTVLTDTYTTDVF-MRNFSKKHA-----MLFTSLRHDSGDPEIFIEKAVRRYEELRVDPKIKYIIFSDSLTPQRAIEIQKLCAGRIKASFGIGTNLTNDVGGGVEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGKHTG----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127362 for 2785 contacts (-45.7/contact) +
2D Compatibility (PS) -36273 + (NN) -14102 + (LL) 11452
1D Compatibility (HY) -12400 + (ID) 4000
Total energy: -182685.0 ( -65.60 by residue)
QMean score : 0.372
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