Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -LSQMSILEKIKDAGVVGCGGAGFPTHAKFSGEVEYLIINAAECEPLLKTDHFVMRNHAVETIKAIEMVKSQV-GAEFAVIATKRYYTEEIAALRSAITELDASVTIHEMDNVYPTGDEQVMVFEVTGRVVPPSGIPLMVGCIVSNVSTMWNVFHAIQDDAPVVRKQLTVTGAVGEPKLLDVPVGTPFEVCLAAAGGTNLDEYLFLDGGPMMGKLNDQSTIADKVVTKTTSGLIVAEDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHDIHPHKVMRHFAVAEDITDIKPDPIWEEAMICCECGICEVIACPMGLSPRQVNIHVKKELLKQGVRYQTDKKEFTPDPMREYKSIAPKNILIKMGLQQYADVH-LEKMHYLEVDEVFIPTKMHIGAPSIPVVSEGDIVKKGDLIAKIPDTALGANIHASIDGQIIRITEEQVHIKKVMS |
| 4ONQ Chain:A ((7-353)) | RLPKPMI-------------GFGVPTE-PLPAMVRRTLPSQAVGPP-----FFYYENVALAPKGVWDTISSSLYDIEPEFVDSKYF----CAAAR-------KRGYIHNLP--------------VENRFPLFPLAP-----------------RTIHEALPLSKKWWPSWDPRTKLNCLQTAIGS------AQLTNRIRKAVEDFDGEP-------PMRVQKFVLDQCRKWNLVWVGRNKVAPLEPDEVEMLLGFPKNHTRGGGI-SRTDRYKSLGNSFQVDTVAYHLSVLKDL----FPGGINVLSLFSGIGGGEVALYRLGI-PLNTVVSV-------------EKSEVNRDIVRSWWEQTNQ----RGNLIHFNDVQQLNGDRLEQLIESFGGFDLVIGGSP------------------------------SLFSSYVRILDL---VKSIMS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ONQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125211 for 2646 contacts (-47.3/contact) +
2D Compatibility (PS) -33278 + (NN) 194 + (LL) 9476
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -165869.0 ( -62.69 by residue)
QMean score : 0.207
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