Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAET---EIPIGVSNRHIHLTET------DYNQLFPNE---PIQVKKWLKQ-PGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVS------GD-IEGTPGIKLVSKHSEICLP----------------KGAIVAKRHIHLPESVANE-----FGVKQGDEVS---------VLVGSEMRSLVLNHCTIRVN-N----QFIPEMHIDTDEANAADIAGTNFAKIIKS------------------------------ |
| 3G3L Chain:A ((10-305)) | --PAEAKYYIAGTITDATTGQELTTAKVTLGDKSVTSSFNEQVNYKAEGYALVVSADGYYPVKRQVYLNQVSDGQTSVATVNVALVSVEAAVIPPVVPPTD-PETDINEGEATKVADKAVEVAKPSESTVTDMLAGTTATPEEKKALDETLEMAGGMKVGETTPEVLADGSILAITPVKFTNPIQDAPAMVPYFYNEGCELTGDVKEVAAPVAVAADIQKAFLSNAAKALNMNAGFVQKIGYTRISVL--NGYSILGYTIKGQLVSKKLTFLISGKYYEGIVSYQKSVMIYPNYYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -555 for 1290 contacts (-0.4/contact) +
2D Compatibility (PS) -21229 + (NN) 7888 + (LL) 676
1D Compatibility (HY) -4000 + (ID) 2000
Total energy: -19220.0 ( -14.90 by residue)
QMean score : 0.145
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