Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTGMNGRIVIADDEPITRMDIRDILEE-ANYNVVGEATDGFEAIELCKSHQPDLVIMDIQMPLLDGLKAGKRIISEGLAGGIILLTAFSDPKNTEKAKGFGALGYLVKPLDEKSLIPTVEMSIAKGRETRKLEQQLEKLTKKLEERKVIEKAKGVLMIENNITEEEAYNMIRNLSMDKRCPMMEIAETIVMSDD
3CZ5 Chain:C ((5-127))
----TARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQAIEAILAGRR-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CZ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69316 for 969 contacts (-71.5/contact) +
2D Compatibility (PS) -13090 + (NN) -6326 + (LL) 6656
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -91776.0 ( -94.71 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3CZ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CZ5-query.scw
PDB file :
Tito_Scwrl_3CZ5.pdb
: