Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MPSIRYIVKTD----VAETFEIIKAGQVGSNI--VFSEVRTFDFGELATLACEKFYFRSSNRAALFVTINNFH--GETEVTIISTGSS-NGFFTGIDWGAAFDYMHSVVADLKR--VAIREVAIEKQEEI
4Q7O Chain:A ((4-136))
MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNITTT--GHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPINLAYHYFNIAISDFLIAHPEYQKKCKEIQKTY
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66119 for 801 contacts (-82.5/contact) +
2D Compatibility (PS) -12104 + (NN) -2474 + (LL) 56
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -84691.0 ( -105.73 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: