Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE
4NL3 Chain:H ((2-72))
-KQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVAL-----
General information:
TITO was launched using:
RESULT:
Template:
4NL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40777 for 436 contacts (-93.5/contact) +
2D Compatibility (PS) -7658 + (NN) -994 + (LL) 160
1D Compatibility (HY) -10800 + (ID) 3550
Total energy: -63619.0 ( -145.92 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_4NL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NL3-query.scw
PDB file :
Tito_Scwrl_4NL3.pdb
: