Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV
1EH1 Chain:A ((3-185))
-LKELYAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQEILG-
General information:
TITO was launched using:
RESULT:
Template:
1EH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46855 for 1292 contacts (-36.3/contact) +
2D Compatibility (PS) -20005 + (NN) -8798 + (LL) 400
1D Compatibility (HY) -14000 + (ID) 4250
Total energy: -93508.0 ( -72.37 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1EH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EH1-query.scw
PDB file :
Tito_Scwrl_1EH1.pdb
: