Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLEYFYLEKNSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKESKVAMWLGVAVIGILSFVFAKFVMTLIPVFLAELFRPIVPGDTAQVFLESLFKLILLLTYIFAVSQTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQKQSRLHYRCGSSFILFTVIVGMFIYLLVPTDPLWLRVVDRILLIPVVLGVAFEVLQLTNKCRNIPVLKYLGVPGLWLQLLTTKEPSDDQVEVAIASFNELLRVEKEGAPIDVVEPDNLELLE |
| 2OKR Chain:C ((1-24)) | ------------------------------------------------------------------------------IKIKKIEDASNPLLLKRRKKARAL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8091 for 85 contacts (95.2/contact) +
2D Compatibility (PS) -2718 + (NN) -3447 + (LL) 25660
1D Compatibility (HY) 400 + (ID) 250
Total energy: 27736.0 ( 326.31 by residue)
QMean score : 0.481
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