Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSRFFSDVAETSSFVFAVAGADD-----EVVLETIRLALKQKLGKFLLFGKKEDKT-L-----TANE--S---------------VTWIQTD---TA-------------EAAAQGAILAVKNKEADILVKGFIPTATLMHHVLKKENGLRTD---QLL--SQIAIFDIPTYHKPLLITD----CAMNVAPKTKEKIAITENALAVAHQ-IGITNPKIALLSA----V---EEVTAKMPSTLEAQEVVQHFGNQISVSGPLALDVAISKEAALHKGITDSSAGEADILIAPNIETGNALYKSLVYFAGAKVGSAVVGAKVPIVISSRN------------DSPENKLASFILTVRLVEK |
| 1YXO Chain:A ((2-325)) | --------------SLRFALTPGEPAGIGPDLCLLLARSAQ---PHPLIAIASRTLLQERAGQLGLAIDLKDVSPAAWPERPAKAGQLYVWDTPLAAPVRPGQLDRANAAYVLETLTRAGQGCLDGHFAGMITAPVHKGVINEAGIPF-SG-HTEFLADLTHTAQVVMMLATRGLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPCLERLRG--EGLDLIGPLPADTLFTPKH--------L-E-HCDAVLAMYHDQGLPVLKYKGFGAAV---NVTLGL--PIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128894 for 2009 contacts (-64.2/contact) +
2D Compatibility (PS) -27105 + (NN) -8757 + (LL) 2148
1D Compatibility (HY) -2800 + (ID) 1750
Total energy: -167158.0 ( -83.20 by residue)
QMean score : 0.384
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