Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKLLQKEAVNLEHYQK-LEAMKQTENQIDNVRADIDSLPIVTEF-RRAQE-D-ANDLLQSIT-TEITTKVTTELEKEN
2OEE Chain:A ((3-112))
-----VNFYDVAYDLENALRGSEEFTRLKNLYDEVNAD--------------------ESAKRMFENFRDVQLQAQKTVALVQQHEKISQLMEAEQRMSMLIGELNKIIMKPLEELY--------
General information:
TITO was launched using:
RESULT:
Template:
2OEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11307 for 430 contacts (-26.3/contact) +
2D Compatibility (PS) -9685 + (NN) -5910 + (LL) 3180
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -27672.0 ( -64.35 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_2OEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OEE-query.scw
PDB file :
Tito_Scwrl_2OEE.pdb
: