Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLL-QKIKAPVYGTELTIALAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMSN-NLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV |
5A0T Chain:B ((18-452)) | -------GLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGIDLILPDFTSIRDRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHR-IRPYTLEVA-EGHRERVGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDGRLTDLHAFARLSEEGIDLLLADSTNAEVPGFVPPERDISNVLRQVFANARKRIIVASFASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDSEVVLVCTGSQGEPMAALSRMANRDH-QIRIVNGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKGNAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVVVDLVEGKAKITGKVQAGYVYVD---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -301782 for 3938 contacts (-76.6/contact) +
2D Compatibility (PS) -48234 + (NN) -30923 + (LL) 9504
1D Compatibility (HY) -35600 + (ID) 7950
Total energy: -414985.0 ( -105.38 by residue)
QMean score : 0.585
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