Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTATQKRFLRKEAHNIQPIFQVGKGS----VSPNLIIHVKEALEARELIKISILQNCEEDKQTVAEKISARSGAEIVQVIGRTIILYKTSVNKQQIKLP--
2BN2 Chain:A ((1-85))
AMSDLELR----------QCLPCGPGGKGRCFGPSICCGD----ELGCFVGTAEALRCQEENY---LPSPCQSGQKPCGSGGRCAAAGICCNDESCVTEPEC
General information:
TITO was launched using:
RESULT:
Template:
2BN2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1578 for 532 contacts (-3.0/contact) +
2D Compatibility (PS) -7669 + (NN) 6150 + (LL) 1884
1D Compatibility (HY) 800 + (ID) 600
Total energy: -1013.0 ( -1.90 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_2BN2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BN2-query.scw
PDB file :
Tito_Scwrl_2BN2.pdb
: