Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MKNTKGKKITIIISIIILILVIATFSGY---------YYVKSQLEPKDE-ASKEKITVE-IPAGSSISDI---STILEDKKVINNASIFSFYVKYNNDTNLKAGNYELSPAMNT---DQIVKKMQEGKTVAPAKLVIPEGYTLDQIADRIV---AYQPKLKKADVLKTMDDPEFVASMIKAYPETVTNDVLNKSI-KHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDV--NIAKYRDELTKQKMSVHKFLTMSSIIEKEAT-----ENVDRKMIASVFYN-----------------RLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNN-GLPPGPISNSGDSSMEAALY---------------------------------PEKSDYLYFLANTKT-GKVYFSKTLEEHNKLKEEHITKNN--------- |
| 3W36 Chain:A ((58-527)) | IEFDLDKDNYIKWAQPTDENAGQSPTLAILGPMDVTVFLWINRVVWLAAFDALAPYHETAVGVYSQIPRRPSSESATNRNLNIAALHAQHGVWKRVLPQQVDQLRELMTALGLDPSDETENLSSPVGIGNVAAKNAFNALKNDGMNFLGYEGRKYNPRPWADYTGYEPVNTAFKVNNPSRWQPQLQAHNARRAGGGPGDLGIYVTQHFVTPQTARTKAHIFRDPSRFRIPRPEFSDHTNTRAYKRSVDEIIDASANLNDERKALAEIMENKLWGIGHSSIVIANKYDQNNEMGVHGWCHWMLAHVLATFEPLIAAWHHKTRFDAVRPVTAIRHVYGNRKIRAWGGVGMGTVDIRASEWSSYLPVGDHPEYPSGSTSLCSATSQAARRYFDSDELDWTINYPAGSTVVEPGITPGKDLSIHIPTWTDFTRTCATSRVWGGVHFQTTVDRTIDFGEQFGDLAHEFVQRHVKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 56181 for 2658 contacts (21.1/contact) +
2D Compatibility (PS) -36427 + (NN) -489 + (LL) 0
1D Compatibility (HY) 0 + (ID) 2850
Total energy: 16415.0 ( 6.18 by residue)
QMean score : 0.075
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