Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVLTFENISYWYKTKDESILNDINYDFEAGVFYTVVGSSGSGKTTFLSLAGGLDTQKEGDIYYKGSSLKS-IGLQQFRNKYVSIVFQSYNLLTYMTALQNVTTA-MEITHVNQPDKKAFALSMLEKVGITEEMARQKVLTLSGGQQQRVSIARALCCETELIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAK-VSDVKLTLKNGSFVEKKQSMNSLINS
4U02 Chain:C ((1-222))
MEPIIRIRNLHKWFGPL--HVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSVKDDRALREIRRE-VGMVFQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQ-ARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQG-GMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRP-------
General information:
TITO was launched using:
RESULT:
Template:
4U02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116031 for 1805 contacts (-64.3/contact) +
2D Compatibility (PS) -23755 + (NN) -6740 + (LL) 804
1D Compatibility (HY) -21600 + (ID) 4000
Total energy: -171322.0 ( -94.92 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4U02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U02-query.scw
PDB file :
Tito_Scwrl_4U02.pdb
: