Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLRNLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDKNAVSGEQMVDLINQLRP-DYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLL-----EKEDIEPP---KLIINRIRTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDPVAMLPNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK
3R9I Chain:C ((2-258))
-ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYILPASQTR---ALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEE----------------
General information:
TITO was launched using:
RESULT:
Template:
3R9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173392 for 2117 contacts (-81.9/contact) +
2D Compatibility (PS) -26098 + (NN) -5321 + (LL) 1432
1D Compatibility (HY) -23600 + (ID) 5600
Total energy: -232579.0 ( -109.86 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_3R9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R9I-query.scw
PDB file :
Tito_Scwrl_3R9I.pdb
: