Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDE--FVHMLVGQEIEGVRRRGKFLLFDLTNCTILSHLRMEGKFRLMDENEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYVNSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK
3SAW Chain:A ((1-273))
-PELPEVETIRRTLLPLIVGKTIEDVRIFWPN-IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVAKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVM---------------------HLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR
General information:
TITO was launched using:
RESULT:
Template:
3SAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110683 for 2008 contacts (-55.1/contact) +
2D Compatibility (PS) -26522 + (NN) -10676 + (LL) 1060
1D Compatibility (HY) -21200 + (ID) 5900
Total energy: -173921.0 ( -86.61 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_3SAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SAW-query.scw
PDB file :
Tito_Scwrl_3SAW.pdb
: