Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQVTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDGKVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNAITLSDHRDLSFGEAYGVIMKE--LR-LLARSVFVVNAVGEIVYTEVVPEGSDHPNYEAAIEAAKKA
3HVS Chain:B ((4-166))
---VHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLK--
General information:
TITO was launched using:
RESULT:
Template:
3HVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80891 for 1278 contacts (-63.3/contact) +
2D Compatibility (PS) -17013 + (NN) -1067 + (LL) 588
1D Compatibility (HY) -16000 + (ID) 3750
Total energy: -118133.0 ( -92.44 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_3HVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HVS-query.scw
PDB file :
Tito_Scwrl_3HVS.pdb
: