Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNR---ANVHYI-EWLNEDKLPNLEDLPVDVCINLAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSK-STIYLDTEENTY-ADNFLGKTVYEWEKTASAA-SDLGIRVVYARFGLVLGTNGGS---FPVFEKLFQ-----TYT-GGRFGNGRQWYSWIHVDDVVAAILFIFDHEQINGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFILGERAMTILDSQRAYPEKLM-SNHFEFRFETLQEALDDLLD |
| 2PK3 Chain:A ((13-315)) | MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQR-VKKVISDIKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAVRDS-NLDCRILTIGSSEEYGMILPEESPVSEEN-QLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPL----QLRP---SEVPTLIGSNKRLKDSTGWKPRI-PLEKSLFEIL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191747 for 2436 contacts (-78.7/contact) +
2D Compatibility (PS) -30743 + (NN) -10643 + (LL) 1020
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -243213.0 ( -99.84 by residue)
QMean score : 0.407
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