Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LNAKELVDGLNPEQRRAVESTEGPLLIMAGAGSGKTRVLTHRIAYLVRERGVNPYNILAITFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDIDRIGYERNFTILDGSDQLSVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYIKE----ASGFYDKMVGEVYEKYEKKLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYIHVDEYQDTNHAQYLLVKQLASRFKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAKTILLEENYRSTKRILEAANRVIENNGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYVVMKIQEEVNNSNRPLSDFAILYRTNAQSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKDILAYLRLISNNEDDISLTRIVNVPKRGVGPGTLDKLNNVATTYDLSLFEVLNRIELAGISPKISKDLVAFHDLIRGFTQMQDFLSVTELVEEILEKTGYRAMLKNERTIEAQTRLENIDEFLSVTQNFEKE--NDDKTLIAFLTDLALVADVDKLEEDNEEQNG--AVTLMTLHSAKGLEFPVVFLVGMEEGIFPHSRAIYE-EDEMEEERRLAYVGITRAEEELFLTSAYSRMLYGRPSSNQESRFIGEIPR-----DLLELGNENKLKADKPYAKPRIPQKTTTAYKSSGAETLGWTVGDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGVKRLLAEFAPIEKV |
4C2T Chain:A ((8-662)) | ----DLLQALNPTQAQAADHFTGPALVIAGAGSGKTRTLIYRIAHLIGHYGVHPGEILAVTFTNKAAAEMRERAGHLVPG-AGDLWMSTFHSAGVRILRTYGEHIGLRRGFVIYDDDDQLDIIKEVMGSIPGIGAETQPRVIRGIIDRAKSNLWTPDDLDRSREPFISGLPRDAAAEAYRRYEVRKKGQNAIDFGDLITETVRLFKEVPGVLDKVQNKAKFIHVDEYQDTNRAQYELTRLLASRDRNLLVVGDPDQSIYKFRGADIQNILDFQKDYPDAKVYMLEHNYRSSARVLEAANKLIENNTERLDKTLKPVKEAGQPVTFHRATDHRAEGDYVADWLT-RLHGEGRAWSEMAILYRTNAQSRVIEESLRRVQIPARIVGGVGFYDRREIRDILAYARLALNPADDVALRRIIGRPRRGIGDTALQKLMEWARTHHTSVLTACANAAEQNILDRGAHKATEFAGLMEAMSEAADNYEPAAFLRFVMETSGYLDLLRQEGQ-EGQVRLENLEELVSAAEEWSQDEANVGGSIADFLDDAALLSS--DMRTKA-----EDAVTLMTLHNAKGLEFPVVFIVGVEQGLLPSKGAIAEGPSGIEEERRLFYVGITRAMERLLMTAAQNRMQFGKTNAAEDSAFLEDIEGLFDTVDPYGQPI------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250732 for 5455 contacts (-46.0/contact) +
2D Compatibility (PS) -68318 + (NN) -29321 + (LL) 5120
1D Compatibility (HY) -46000 + (ID) 14200
Total energy: -403451.0 ( -73.96 by residue)
QMean score : 0.500
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