Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPS-VAVQAISLVDGLLLTGGQ-DITPQFYLEEPSQEIGAYFPPRDSYEIALVRAA-LDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDE-QLGSHTIDI--EPTSELAKHHPNKKLVNSLHHQFIK--------KLAPSFKVTARTADGMIEAVEGDN-LPSWYLGVQWHPELMFQTD-------------PESEQLFQALVDESKKTMVK |
1L9X Chain:A ((30-282)) | -KPIIGILMQKCRNKVMK--NYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVA-----------KIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDV--AM--PLNFTGGQLHSRMFQNFPTELLLSLA-VEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32505 for 1865 contacts (-17.4/contact) +
2D Compatibility (PS) -23561 + (NN) -4546 + (LL) 1324
1D Compatibility (HY) -8000 + (ID) 2300
Total energy: -69588.0 ( -37.31 by residue)
QMean score : 0.280
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