Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKERVIIVGSGISGCTAALRLMQDYDVTIITKGYKEESNSMLAQGGVAAAVSKNDTPKKHFSDTFQAGCFHNKVLAVNQLVTHGPMVIQKLIAEGMAFD---EQDGELALGL--EGAHQLPRILHTGGDQTGKFLTTFLQEKL---TDIHWQEQKMAIEIIKQND-------SAIGVHCLDKENR-LHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDMEFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAIMTDVHPRADLAPRDIVAATLFAEIQD--GNEVFLDITAIPN--FEKRFPGITANLDAHHIPFRETKRIPVHPGAHFLMGGIRTDLSGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYIRTQKINPIDHPEIPLSNQIQTPHLPDKQLLQEK-------IWETLGITRKPEKITEFLHWLTDF-----DYANHTRKTA---EISHMLITAKLIAESALKRTESLGAHRILKGVIK |
| 1KNR Chain:A ((11-517)) | -----VLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILH-AADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQ-EPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANLMASNSLLECLVYGWSAAEDITRRMPYAHDISTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253849 for 4339 contacts (-58.5/contact) +
2D Compatibility (PS) -49718 + (NN) -6459 + (LL) 1136
1D Compatibility (HY) -29200 + (ID) 8600
Total energy: -346690.0 ( -79.90 by residue)
QMean score : 0.490
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