Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQEYIRLRGARENNLQNISLDIPKRKITIFTGVSGSGKSSIVFETIATESQRQLNETYSAYLRNFLPKYTQPDADSIENLSTSVIIDQKRLGGNSRSTLGTITDINSILRLLFSRVGKPSIGTANLFSFNDPAGMCPDCHGVGQKVSVDLVKLL-DPNKSLKEGAILFPTFSVDSWYWNSYAYSGF-----FDVNKKIKDYTDEEYDMLLHGKDIKVFLE-----TPMGSMNATYEGLIPKFNRLYIQKEGEMSASTKKRVDKFTHIAPCTTCEGTRLSAQALSCKING---ANIADFTAMQLDELKD-----TIARIDDPIATPMVKSVTERLQHLIDIGLGYMTLDRQTASLSGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTILVVEHDPDVIKIADHVVDVGPHAGKHGGEIQFVGSYTDLLKS-DTLTGQFLNRH----LPINSKPRQPKGFLTTEKSSRFNLKNIQANIPKEVLTVITGVAGSGKSTLIHSVFLK----------------------EYPDAIV-IDQSAAHANIRSNPATYTGIMDPIRKAFGKENDV-----SPSLFSYNSKGA-CENCKGLGFTTMDLAFMDSIRTPCEVCHGKRFQDSVLQYKLNGKSISDVLELTVSEALDFFTD-KKILKKIEAMEEVGIGYVTLGQALSTLSGGECQRLKLANELHKKG---SIYIMDEPTTGLHMSDIEHILTIIHTLVNKGNTVIVIEHNVDIIRNADWIIDLGPEGGSAGGQIIFEGAPLDLLENQQSLTAKYL |
| 3ZQJ Chain:C ((294-970)) | -------------------------------------------------------------------------------------------------------------------------------FSFNSPYGACPECSGLGIRKEVDPELVVP---------AVA-PWSNGHTAEYFTRMMAGLGEALG------------KARKAILEGADEQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQ---MKERYEGFMRDVPCPVCAGTRLKPEILAVTLAGHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSRLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDSITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212154 for 4623 contacts (-45.9/contact) +
2D Compatibility (PS) -62914 + (NN) -12672 + (LL) 8288
1D Compatibility (HY) -47600 + (ID) 12750
Total energy: -339802.0 ( -73.50 by residue)
QMean score : 0.336
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